PDFrankenstein is a GUI tool that intends to fill the gap on Linux where a good capable PDF annotator like Adobe Acrobat does not exist.

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[–]Anman 1 insightful - 1 fun1 insightful - 0 fun2 insightful - 1 fun -  (0 children)

The need to highlight the fact it is a GUI tool is why linux will never be mainstream.

[–]LarrySwinger2 1 insightful - 1 fun1 insightful - 0 fun2 insightful - 1 fun -  (0 children)

Note that there's also Hypothesis, which lets you annotate PDFs that you have open in a browser. It's a webapp but you can host your own instance.